BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032G05LP1|AL429621
(904 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig469 1122 0.0
3x_Contig1088 184 2e-46
>3x_Contig469
Length = 1772
Score = 1122 bits (566), Expect = 0.0
Identities = 573/574 (99%), Gaps = 1/574 (0%)
Strand = Plus / Minus
Query: 331 attaatttaacttcctcgatatatgcaggttcagaagagtggtaagttttgatcttcgtt 390
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1771 attaatttaacttcctcg-tatatgcaggttcagaagagtggtaagttttgatcttcgtt 1713
Query: 391 ttattcaaggtgtcatcaaagtatgcacaaattggatcaccttcttcaacgtaggtacct 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1712 ttattcaaggtgtcatcaaagtatgcacaaattggatcaccttcttcaacgtaggtacct 1653
Query: 451 atcagtggtaaaccatcgtcgtcaagcttttcaagccattccttgggccactcgtctgta 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1652 atcagtggtaaaccatcgtcgtcaagcttttcaagccattccttgggccactcgtctgta 1593
Query: 511 ccgaatccgaaatgctgggtaattggatcaccacggcttctgttcatagacaaattgacc 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1592 ccgaatccgaaatgctgggtaattggatcaccacggcttctgttcatagacaaattgacc 1533
Query: 571 ttttccaccttatacattgtaccatatccaaaacctctttcatcagccgatttgttgata 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1532 ttttccaccttatacattgtaccatatccaaaacctctttcatcagccgatttgttgata 1473
Query: 631 atcattgcatcatccatatcgtaaccagtgtaagaaataaccgcaaccactgcattggta 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1472 atcattgcatcatccatatcgtaaccagtgtaagaaataaccgcaaccactgcattggta 1413
Query: 691 ccgttagggaagttatccataccataatcatcgtagaggttagccttaacaattggtgtc 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1412 ccgttagggaagttatccataccataatcatcgtagaggttagccttaacaattggtgtc 1353
Query: 751 tgaccggtttgcaacctgtataatttgttatcagaacgatggcatagagccacaccagga 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1352 tgaccggtttgcaacctgtataatttgttatcagaacgatggcatagagccacaccagga 1293
Query: 811 gtacccatggtttgtttacccatttgacattggtacatatttcttggagattgattgaaa 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1292 gtacccatggtttgtttacccatttgacattggtacatatttcttggagattgattgaaa 1233
Query: 871 tcagagaatggtgttaggttagccaagatagaaa 904
||||||||||||||||||||||||||||||||||
Sbjct: 1232 tcagagaatggtgttaggttagccaagatagaaa 1199
>3x_Contig1088
Length = 4585
Score = 184 bits (93), Expect = 2e-46
Identities = 106/109 (97%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 5 ccgaagtagt-agcgggggtgtcactctcgttgaaagtccatggagtagaatcttgagca 63
|||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 110 ccgaagtagtcagcgggggtgtcactctcgttgaaagtccatggaaaagaatcttgagca 51
Query: 64 ataccatgcaatgcacctgctttaccagcaagagattcgacaaacatac 112
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 ataccatgcaatgcacctgctttaccagcaagagattcgacaaacatac 2
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6356
Number of Sequences: 1807
Number of extensions: 6356
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 2
length of query: 904
length of database: 10,358,551
effective HSP length: 16
effective length of query: 888
effective length of database: 10,329,639
effective search space: 9172719432
effective search space used: 9172719432
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)